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Previous Versions

Cell Ranger ARC 2.1.0 (Oct 6, 2025)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 852 MB
    md5sum: 64018a2d04f0573a6e9d5d5ed7932d82
    curl -o cellranger-arc-2.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.gz?Expires=1774625910&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=L0s1HzMm7-BQ2ZDd7m8ZW-fnhTwScBy2OhYWmZ05iIt05rM501i8jLIvjQKzny3uw5u4JYtNa9ouqaXmr7keSqWg63QiqKcuX8B6YjPcoKoAnYhwSoz0J5juymt96SSq0Kb97iGfCuRZvN4IsstooMHEaM-I4Fh2zISZn~fmIPIbYV~-eL8VvLU2EzF1rxZMPMatHeg~WZUtFedcTAPNJnQ8OWTZT8aR5F~JHhVatg3hqLY39T7LNNX0FQeUs38VO71ZZuXUOBP7Sh0BC8NVJmGOZJovm7pAEwMmSDY9EkGASJ3soo1wPWy-lx4rGxqS6jQak-KBx4Sij6em6Ntv6w__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 607 MB
    md5sum: 8a8b495fad481b7da3e23eef8f99d9a4
    curl -o cellranger-arc-2.1.0.tar.xz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.xz?Expires=1774625910&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ioDvFqzbmjjB0lDWxpUFp~c28EseRlLhpDFHw2MIRB8BGLMNgCqWcivh2I8H2FVF4PdFCAhCE1MzH5oXCzz207FRqnDTXO4fmKP5KNpCRg9~850KLJ8VqpE5fjrHV79PBP6~DDbzv0JdEFKJoSRkkzW-CB8uJDlkRpQKjoO4QnoFWwxxTkx0ktKf7h9Hc35CmTbAKx4NIQT2VCq0t4Dvknc39tdXp9eliX-wMaQgpHGnNQyZLvKSgp5LyXOjP59h5OaHccDKCAg95soFFyW75m1pcaVa7kBAaLs4iWg6dFCsLY-mFcdhnFogMpftR7E1vK3zXp1pI1EQs5oUSM9~Qw__"

Download is unavailable on mobile devices.

Cell Ranger ARC v2.1.0 highlights

  • Users can now perform automated cell type annotations using Gene Expression libraries.
  • Includes anonymized telemetry data collection to help 10x Genomics improve product functionality.
  • Strand information is now included in the `fragments.tsv` file.
  • Improvements to computational performance.
Release notes

Cell Ranger ARC 2.0.2 (Aug 18, 2022)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 699 MB
    md5sum: 7303f8ceee7b60113c9a0087268830cd
    curl -o cellranger-arc-2.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.0.2.tar.gz?Expires=1774625910&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=CVULgNV3SoeV9rY0Z8KKrgvsJfhY~y4~dWlqmIeJGBqUWJijAMt1Oa8U8oY-N3VzoD1nePo4U~0IqEjJuZ4MCDH7uvZnaAl-WyC9Jksh84zstMrlIMO1wnk1MHjSuC0PQPsW6xOGhHRDhZOmT3CSQvoKMzrgD4k7ZYFKYGUxfAR4mIcubmFVAxulLalNU2brvnX30nbCeYvWrFVjNUQsyeMfUyqjUvHg~3PM2fPg9DBlBb18pxYTp~Y0OFTHCFP7gvdhdr7Jrwgmi~Yqq3jCJsXzIOvM1U8S9ldhC-MPR-FyfBce~VlTQ6FP3KsQE6st7bwtm8r43BtFH7e8nby6QQ__"

Download is unavailable on mobile devices.

Cell Ranger ARC 2.0.2 highlights

  • New: 2024-A reference transcriptomes now available for human and mouse
  • New feature: wavelet-based peak caller to improve detection of cluster-specific peaks
  • Improvements to duplicate marking algorithm
  • Improvements to computational performance: ~4x faster, 0.5x disk requirements
Release notes