Support homeCell Ranger ARCDownload and Installation
Previous Versions

Previous Versions

Cell Ranger ARC 2.1.0 (Oct 6, 2025)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 852 MB
    md5sum: 64018a2d04f0573a6e9d5d5ed7932d82
    curl -o cellranger-arc-2.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.gz?Expires=1774626509&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=oHiEWxkuCwmVrRAjLsKkjkEHamQCiERKCMH4YsRirFP-mMmjESZ6UTch11sKuvYgemB4QXOjH4uqbBi6fk0mwANxzGQ-05Z~dTqDdx1XX3oMwhXmDE-eg8lkSqUpQ7BclqGkb5p~4cPwbjXDFQ7aT5kIaPsduhWR3kf9ncQC-LahJeKp~Xlzrrfqowew~BIADbGN9eUaCYKi-QkDAIA6xmPLjnPThL~BCQ8GZhYPAyJak6xamALsSS8iV9FVabA5ar0kxH3vvXADUsPNrJi80hmxeqZFS14EGAdtFV9AhSz2onOEoTb~2iIx-gJIAWzN2BvrBzlXsqgzs5QItt1nxA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 607 MB
    md5sum: 8a8b495fad481b7da3e23eef8f99d9a4
    curl -o cellranger-arc-2.1.0.tar.xz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.xz?Expires=1774626509&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=owuNIk0NWBg~AEuUAcgfUpncmHbKvNtygD0qljH~vqQMmT2yyOBhE4eMGwjcUBQEpA27iVnHWYuHK6j9p0-cA9~XzZqf3VJEgXk5K~6Qurb2VijbmtjbydqUcTk5JSvX8qRdua7IjEQmjc9CRnfl6qqEUx-LS0YoCcZsFbD2i2VfIqNv3Az~-orHldoI-3wRTcnsVRb6oonWjdwC6Gc3eYDVXkmVudlpvysNapNdWMhB2zCdFHe7Lar7jiqGn00XInTw7h--VMkd2tw-d-A9TYzAe5geMwrgnskyPrrNi9weRUnxpBED33DfgffFPWoCl1VTKilAR8CudnhwNCP9-Q__"

Download is unavailable on mobile devices.

Cell Ranger ARC v2.1.0 highlights

  • Users can now perform automated cell type annotations using Gene Expression libraries.
  • Includes anonymized telemetry data collection to help 10x Genomics improve product functionality.
  • Strand information is now included in the `fragments.tsv` file.
  • Improvements to computational performance.
Release notes

Cell Ranger ARC 2.0.2 (Aug 18, 2022)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 699 MB
    md5sum: 7303f8ceee7b60113c9a0087268830cd
    curl -o cellranger-arc-2.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.0.2.tar.gz?Expires=1774626509&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Jc92FF38EE31EWl7GlBZL8VZ-bq6MgZk-4qzI-aTaXRJjO~bLoyDR-ekxtlXQz82se04lBibMdoqWoaKXaNcthd4sKpmOkX34FVFqCT5TjnE9iEQLm3A-s8KyUubvCLoAcsO5DyTGlFXYwduqU2ryouNGsXpx3NsWFTvyLpY5HwmOy1r8Mcvw6-7ot5fPNPFANWb1Ll3RDylJfXJSEejDOzwZOV2UEtHw9D3f3yK5bNAVogtaP9x4hNMevwxJsGe~ja80FGmaMjxtTHpWkqcE7~6tWZLVn9A1ywXSU6PyDY-xWY0q0gacGeHB7rDkYzxOLLtcl2tIlNWcW7J2~ZCnA__"

Download is unavailable on mobile devices.

Cell Ranger ARC 2.0.2 highlights

  • New: 2024-A reference transcriptomes now available for human and mouse
  • New feature: wavelet-based peak caller to improve detection of cluster-specific peaks
  • Improvements to duplicate marking algorithm
  • Improvements to computational performance: ~4x faster, 0.5x disk requirements
Release notes