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Previous Versions

Previous Versions

Cell Ranger ARC 2.1.0 (Oct 6, 2025)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 852 MB
    md5sum: 64018a2d04f0573a6e9d5d5ed7932d82
    curl -o cellranger-arc-2.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.gz?Expires=1774630391&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=AgIuzD00a8mniQK668W2-h~sOqbiJzGBk855UaPCb0hjYDR89vJHigJtjFyNG0WIUz9kDyN2eSAprqQSOYHAzdaE33mU2YHw0z7PxtUfhORn8wafgQu0HHNqkKkVOeEqoPS97bDAZjbMp53lV9PZiosKwbIX3-zjF6umdQOon40DS6ZciS9tSm9m~afSsQJtl92Xzd53BxbTqA4QVUgrUTiH9vxajNyfuz0iOFWQJYMtADH6-FQbKxYLJu4FBLPVUK2igtoGBU3VRFkOuoZCX3akdHtrF0-O8th9DnX7US41ftiQvLE98mMQm22YfjV-yz739PnxnoVc7yo8t428-Q__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 607 MB
    md5sum: 8a8b495fad481b7da3e23eef8f99d9a4
    curl -o cellranger-arc-2.1.0.tar.xz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.xz?Expires=1774630391&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=OwFkitvGenjAigZuDNCN7shwOD7DDS5Zjot8vWF0e0uM2zjw5Psut78m~iyVkwl95p4xLH0FDCFxf42wHcbkZFPOxwnA~2TBb7xExseolprY~SlwP2G2-rJVvo~9XS2x4OzHy3VLdY0Ds1y0hrBoYmSFJI8vXPO6-JchzJDy4X8LXk-OGiD04gD-XyjwsTqRzmbUQl8~Hz3TCPA~-FerU74BQw-i2RU952ROEQMO7bYCd5yPWRv-J7Leka8dXyK3rbXB8FMPQgagrwOboWKkyjo8esmVj8i3m4VfbBc8T8KJz4IyP8HmWoWEzPt2nmhPG9VQCgXDYW~354Jqylc40A__"

Download is unavailable on mobile devices.

Cell Ranger ARC v2.1.0 highlights

  • Users can now perform automated cell type annotations using Gene Expression libraries.
  • Includes anonymized telemetry data collection to help 10x Genomics improve product functionality.
  • Strand information is now included in the `fragments.tsv` file.
  • Improvements to computational performance.
Release notes

Cell Ranger ARC 2.0.2 (Aug 18, 2022)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 699 MB
    md5sum: 7303f8ceee7b60113c9a0087268830cd
    curl -o cellranger-arc-2.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.0.2.tar.gz?Expires=1774630391&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=bA2TOndfJawsTYMiQ2N9b1k7djLuwumhc6PxVtdE9O1r3Y3P5Cv~NRwDwIRB1PLMExAXEVz2-nx88wqgkaS4b~TbaMApgP5efRfJ3Te~~5Nb~Dlt2256DWGRfT0bxUOWLnK8v1Fz78NrAga3pclOoimlJztdLQDg2MjV~3EGVXpq7VPUDLxrv3lwoaOCJSkNIw4IhMSYnss~cfADaC2kCAv~pAGxFOdeY5Aux7HlqD7q9ChjH1Qg2GysNqXd9onLscWZ3deDwCa2-XbtSIsF5JrcoWak6CRcAv4j0OtTj0mt3VXhl8BpSA7SoOkVP3agEDlEQPP2tk2JOwPoR9eVbg__"

Download is unavailable on mobile devices.

Cell Ranger ARC 2.0.2 highlights

  • New: 2024-A reference transcriptomes now available for human and mouse
  • New feature: wavelet-based peak caller to improve detection of cluster-specific peaks
  • Improvements to duplicate marking algorithm
  • Improvements to computational performance: ~4x faster, 0.5x disk requirements
Release notes