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Previous Versions

Cell Ranger ARC 2.1.0 (Oct 6, 2025)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 852 MB
    md5sum: 64018a2d04f0573a6e9d5d5ed7932d82
    curl -o cellranger-arc-2.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.gz?Expires=1774630385&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=RN4GQROenlqvF5Dc-~BTSCnL1vDK1D41HjaYcMsIMZyZlVBsGhx5yQSOHHegi5W7VdjL6krtIc5FCLNtfDvoBKIpD0iJR5K-V7gfeNE9iI1wSOxQ9xoePw5l45b4ywpS3SMk5n3e9A8E9GBBglLmz-T2ISx2VZKhlYlH7-COPbuz~tf49hWYWr7V9HITuUAUyUo~O3gtHOdo~wFQT4WkcPD7S8CbxeUuE9pS7OQDQd-23AVI~J9lXnk8ry~k~WGogNviEHyWLjM2Su5gwo8eXOUtH~cFSbY~n~WkU~peiFmuk55KHh9Mhv2qS4A1r2Kmg7EJibqcgVMtUu5v7wpG5g__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 607 MB
    md5sum: 8a8b495fad481b7da3e23eef8f99d9a4
    curl -o cellranger-arc-2.1.0.tar.xz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.xz?Expires=1774630385&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=CWDFvtBtuygD9BtUEatySqwW6ys-OpRlrLayQ27NXrIQ12DP7mAZEgYXJxRjGd9KMrMR5y-O5~58MVCLqn1mBVV7TkzbCeQUtj5iyMe2a5OqcIWrfNxhFPcsyNmY-KAHG2TcOzdFuqiKhe1hy2R6O0P1lodRGIyKSe78K2WS08TLcKcTYqSyBGRwUi-GFvCjCmP0lIEyj1Q3-UuzIKMvbPrMiIA89Ac7P0IVko0hiWFPUMueFOEYTEWqD59GiTEoGfkF9JZqmioU3nAorH4dSiCnvpmIc2FRtgAen9pbxktFZzDHcWNC~ZyE95fjZHoy~mH~byit680T2G1ke60ZVg__"

Download is unavailable on mobile devices.

Cell Ranger ARC v2.1.0 highlights

  • Users can now perform automated cell type annotations using Gene Expression libraries.
  • Includes anonymized telemetry data collection to help 10x Genomics improve product functionality.
  • Strand information is now included in the `fragments.tsv` file.
  • Improvements to computational performance.
Release notes

Cell Ranger ARC 2.0.2 (Aug 18, 2022)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 699 MB
    md5sum: 7303f8ceee7b60113c9a0087268830cd
    curl -o cellranger-arc-2.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.0.2.tar.gz?Expires=1774630385&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=mJ660Xhj2b5m0P~r8Nddxc9NV~xOql-U4jwLJ32t5GO24W1S5E3Igbd7rHBi8UzgCt56K0AjgvfCn0pCGp8wY1rLL01UbYmFDv1QA37YN~AyOyUEoVUUgkXexRXiA2I9ZoQjkRMYOkAyBUdyUgqUPRMQb4yobzoEb25Mk14HOsV0dwJzvpsKlL2pxvlW0KH86EZkglPqq2uOCA3ISXRFuAHijHMCIsmKI~QkMJCHACu0zl~HToCO9woJjtsJOenr~2Xh5Ef~O2TjbDoTiuaKNZJ1Qpq-wsGue2jaVDnZoXAoYiTgHTM4mNb~zgRztsCia6GPpV~TnTgM14BTLS3GTA__"

Download is unavailable on mobile devices.

Cell Ranger ARC 2.0.2 highlights

  • New: 2024-A reference transcriptomes now available for human and mouse
  • New feature: wavelet-based peak caller to improve detection of cluster-specific peaks
  • Improvements to duplicate marking algorithm
  • Improvements to computational performance: ~4x faster, 0.5x disk requirements
Release notes