Support homeCell Ranger ARCDownload and Installation
Previous Versions

Previous Versions

Cell Ranger ARC 2.1.0 (Oct 6, 2025)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 852 MB
    md5sum: 64018a2d04f0573a6e9d5d5ed7932d82
    curl -o cellranger-arc-2.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.gz?Expires=1774621926&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=fOcWHoDVBFsWUwDSVLNRY04iLEYCvRFgp21P87JIWqVZBaujCkekSDoOecxBHmSqcIN~YMDP0Qv5Jf8GKZUcGPyPC67WOLh5ziSL0QKrOi0KMS2WyEns6v2GnPfmFyI04zPtT4Q2X-Dqg5Ma4ZCBvLhUQ0waQq9XBDc-P5ZxtpT8USxArPfa6yi7d9DngX6MEhmu6s28XM0pFqn9KKeU892vRrlYa2wFToRmLcK~O5tsCKiVR48zs-ADzkqzcJAvinBSRKQZZzLDUU~xSVPB7DHdlT6UqgelPnTwant41Fb6hHCKGtmNAc0SoUDCTtk1hHVNNq3kvZWSSvVYghfmcQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 607 MB
    md5sum: 8a8b495fad481b7da3e23eef8f99d9a4
    curl -o cellranger-arc-2.1.0.tar.xz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.xz?Expires=1774621926&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=fD5PESve6k17kw9n93wyNjwISkdceNPMeEszhRD0r86lYQrfhUkk7s8UYF2y1EgTOL1db-QhZbqZSf41z0gS5kPDIbZXNa8FnfwGnEvYhUw5sL6aXLdQGxVdHGLpo-QV29FktnYsHrC150AnmQYRCe0ZonpjqXGD2WmTlcQSXuc64BVkiWUHFg1zsk6zKM-Uw2guccyUvDB9oI-KBlsYUuKXkVcIM8IkXsqS61NKkPJxDMBBYh2Y0DuTCTMgZ5NghMP4yR3Sf-dMS67MqY-9qC09odmuCq7jwwtGqqhvSm85PumdGtQEn9doiP~I7H04cZUqoV2NTSuWyy1GrVvsHw__"

Download is unavailable on mobile devices.

Cell Ranger ARC v2.1.0 highlights

  • Users can now perform automated cell type annotations using Gene Expression libraries.
  • Includes anonymized telemetry data collection to help 10x Genomics improve product functionality.
  • Strand information is now included in the `fragments.tsv` file.
  • Improvements to computational performance.
Release notes

Cell Ranger ARC 2.0.2 (Aug 18, 2022)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 699 MB
    md5sum: 7303f8ceee7b60113c9a0087268830cd
    curl -o cellranger-arc-2.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.0.2.tar.gz?Expires=1774621926&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=LSOWfLwed3tdDTmx4M95x65GgQvQxui6AppeG5qdbfXN6SENKwFIjrm7I6fFz~cHkfLoIUgkPfXlUHsAYJixqvywFh3xWOwx~kVsOkGSxRj~HoVQHq3rKroVHP4939wIoTzpeEO4lZ613qjYkiycRLVx1gUS41am~DM8m~hvB9S7LMg0eW49lcH-9K-DZNRo22JwDohmv8tcYsVu-oAlBsL93HvxQ3cmMP8ZKF3QDDR2GRGgaxwrPxuHwYQDKTKRGGWgnQ41XDP1cmTx-plREFkaRQJdXBq-Z43DgIBiwYZLs1F2hsqr66Mf-9LiarSv-bE9-hoks2xOhcx~mf110g__"

Download is unavailable on mobile devices.

Cell Ranger ARC 2.0.2 highlights

  • New: 2024-A reference transcriptomes now available for human and mouse
  • New feature: wavelet-based peak caller to improve detection of cluster-specific peaks
  • Improvements to duplicate marking algorithm
  • Improvements to computational performance: ~4x faster, 0.5x disk requirements
Release notes