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Previous Versions

Previous Versions

Cell Ranger ARC 2.1.0 (Oct 6, 2025)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 852 MB
    md5sum: 64018a2d04f0573a6e9d5d5ed7932d82
    curl -o cellranger-arc-2.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.gz?Expires=1774626508&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=eOUzGfzJOznk2JEQCqSAZrGhsKB8wi1Ig7d1RK505ipMAM599p8hUXbZDjfQhhHPI8SmQjcsvBnGfXa1ma2P~R8G3jz29CejqQsXi0zo595c-bUaVmB~f63seSOZpRsFOU~G4E-pzPfuLFV4wXY3i02CwuxgDI7hxd4RjVoegpu70~g0ma9NUcoc5Tgo9ilEgZSvu5fJs8UN1T9q6PWQ7pzCUnjJ9f99YEU9YiZ6FEjmWFm~y3N9CHrzUIMv-~vbmBpnvk3-uee2rZKzbiROka6bwx4eVMfVnn3Dv5w1m6r5xciNrwZaGKirfnla~vGWJPYJbgrt6G9yaYaMUY-kog__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 607 MB
    md5sum: 8a8b495fad481b7da3e23eef8f99d9a4
    curl -o cellranger-arc-2.1.0.tar.xz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.xz?Expires=1774626508&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=HJPTOt77fGpuokpfRC9dQ1INYSAeEijgUKDzLSpHBjkG8AeaZywUCULoYWE3W-qtKtrTM1qwMMPtj5ID3fmXcSJK0O7E-rzKoyttq1ibcA5-zDz0eszrFzY~pOBwKS3ghgFl5DhUBSQiHI8sXbfkz4sQojbdjVsSy-mkhXfCHFwVF37xLpPujt6~LlfoAz2bEiPngTAiu6AwEbbTZ4yhClUJdua2NQ-ZczxhunnK6BI2rEOkA4Z45UkIRlYo0wbDoZLpOImkx2GA~EN4DDRw9WuDSQtCW9GuTYWuvVDu7eQnUIvw1kkF~x8q~CxgHRCfzeDpEyZ8YtP9eHMzgnLFVg__"

Download is unavailable on mobile devices.

Cell Ranger ARC v2.1.0 highlights

  • Users can now perform automated cell type annotations using Gene Expression libraries.
  • Includes anonymized telemetry data collection to help 10x Genomics improve product functionality.
  • Strand information is now included in the `fragments.tsv` file.
  • Improvements to computational performance.
Release notes

Cell Ranger ARC 2.0.2 (Aug 18, 2022)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 699 MB
    md5sum: 7303f8ceee7b60113c9a0087268830cd
    curl -o cellranger-arc-2.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.0.2.tar.gz?Expires=1774626508&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=LCGaUYspRbT-J6PAjkqntPt2sd4G7B8Y6R7WILZ5iCA0vGSS~~Xc0QlBkT61ETvyKuf~UZDRWGtOjenD9TLShUzEQRMfNwSggv-OVldEWePj5YK~COffFpjNLZMKeYMdGFcbUFqyvuEbWpbSY66xnIQOcb7~Tgjl0PD2jb~DPfXAIRqRvyIqfwq4fBsyU8lCTQxXkJeb560h7zWjKjqlQZjJIZ21lvO3rxihLYPtGvmyZhEx1hjepjqZRW76JRCO9rMB4qse-9fbjeVJXSkdZ~30liRja5CJATpB47uOgY3azuFbfPIWEgkL1L-hJeU8nang1I9J0yByq0KDtuwbhQ__"

Download is unavailable on mobile devices.

Cell Ranger ARC 2.0.2 highlights

  • New: 2024-A reference transcriptomes now available for human and mouse
  • New feature: wavelet-based peak caller to improve detection of cluster-specific peaks
  • Improvements to duplicate marking algorithm
  • Improvements to computational performance: ~4x faster, 0.5x disk requirements
Release notes